Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_32741542_32742179_R

Intron Information:

Intron Rank:

129113

Intron Class:

major

Intron Phase:

Intron Coordinates:

32741542 - 32742179

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGC

5'SS Class:

major

3'SS Sequence:

GATACATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTATTTGTAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.6

37.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

62.6

0.28

1.1

54.2

44.6

Minor 5ss

30.1

-2.3

3.4

41.8

Minor BPS

-0

2.1

71.65

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040281

32741189 - 32755486

14298