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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_32948776_32956080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32948776 - 32956080

Intron Length:

7305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTATTATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CTGCCCCTATTA

Flanking Amino Acid:

ILDLNRANEKEYQETAEKNK

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

0.54

0.9

65.5

39.7

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

46.7

-0.2

1.9

57.23

42.5

Associated Gene:

Gene:

CCDC171

Ensembl Gene ID:

ENSAPLG00000011943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041065

32852298 - 33024755

172458