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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_32963318_32968256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32963318 - 32968256

Intron Length:

4939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATGGGCTTAATT

Flanking Amino Acid:

SFAMSGQRTAGTCKDKDKPS

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

35.8

Major BPS

100

1.24

0.5

100

Major PPT

86.5

0.82

0.7

85.9

28.3

Minor 5ss

35.9

-1.6

2.6

42.1

44.4

Minor BPS

58.3

0.34

1.9

73.7

43.9

Associated Gene:

Gene:

CCDC171

Ensembl Gene ID:

ENSAPLG00000011943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022662

32852298 - 33024755

172458

ENSAPLT00000034438

32862886 - 33024755

161870

ENSAPLT00000012443

32892854 - 33024718

131865

ENSAPLT00000033288

32852298 - 33024755

172458

ENSAPLT00000031244

32852298 - 33024755

172458

ENSAPLT00000044664

32852311 - 33024755

172445

ENSAPLT00000026989

32852311 - 33024897

172587

ENSAPLT00000041065

32852298 - 33024755

172458