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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_32989404_33007581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32989404 - 33007581

Intron Length:

18178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

ACTGTATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATTTCTTCAAAC

Flanking Amino Acid:

ERTKLESVLQAATVRIKKLE

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

0.5

0.9

62.8

42.7

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

64.2

0.43

1.6

74.58

35.5

Associated Gene:

Gene:

CCDC171

Ensembl Gene ID:

ENSAPLG00000011943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022662

32852298 - 33024755

172458

ENSAPLT00000034438

32862886 - 33024755

161870

ENSAPLT00000012443

32892854 - 33024718

131865

ENSAPLT00000033288

32852298 - 33024755

172458

ENSAPLT00000031244

32852298 - 33024755

172458

ENSAPLT00000044664

32852311 - 33024755

172445

ENSAPLT00000026989

32852311 - 33024897

172587

ENSAPLT00000041065

32852298 - 33024755

172458