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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33021415_33024546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33021415 - 33024546

Intron Length:

3132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCATATTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTATTTTGAAAA

Flanking Amino Acid:

TVIPAVQEANCLDSDKNESQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

76.6

34.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.2

0.72

0.9

76.7

36.8

Minor 5ss

44.5

-0.6

3.1

61.3

44.6

Minor BPS

53.4

0.1

1.5

62.98

36.6

Associated Gene:

Gene:

CCDC171

Ensembl Gene ID:

ENSAPLG00000011943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022662

32852298 - 33024755

172458

ENSAPLT00000034438

32862886 - 33024755

161870

ENSAPLT00000012443

32892854 - 33024718

131865

ENSAPLT00000033288

32852298 - 33024755

172458

ENSAPLT00000031244

32852298 - 33024755

172458

ENSAPLT00000044664

32852311 - 33024755

172445

ENSAPLT00000026989

32852311 - 33024897

172587

ENSAPLT00000041065

32852298 - 33024755

172458