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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33024719_33024855_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33024719 - 33024855

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GTCTCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

GTCTCTGTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.3

47.1

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

78.3

0.64

0.9

71.7

38.2

Minor 5ss

33.9

-1.8

3.4

39.3

Minor BPS

47.8

-0.1

2.3

63.48

42.9

Associated Gene:

Gene:

CCDC171

Ensembl Gene ID:

ENSAPLG00000011943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026989

32852311 - 33024897

172587