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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33148273_33173629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33148273 - 33173629

Intron Length:

25357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

TTTGCCTAAATT

Flanking Amino Acid:

NFEDAFENIPVASKMDLKTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.4

36.1

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

91.7

0.94

0.5

92.2

18.3

Minor 5ss

-1.4

2.8

46.6

41.8

Minor BPS

0.71

1.7

87.41

38.9

Associated Gene:

Gene:

TTC39B

Ensembl Gene ID:

ENSAPLG00000012421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035501

33130273 - 33200526

70254

ENSAPLT00000032952

33125828 - 33200526

74699