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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33176465_33177417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33176465 - 33177417

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

ATGACTGATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TTTTCTTCCATG

Flanking Amino Acid:

TMKDALQTCQRFRKRNTVVE

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

63.2

0.3

1.1

59.1

45.7

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

52.6

-0

67.06

41.5

Associated Gene:

Gene:

TTC39B

Ensembl Gene ID:

ENSAPLG00000012421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035501

33130273 - 33200526

70254

ENSAPLT00000032952

33125828 - 33200526

74699

ENSAPLT00000012969

33158501 - 33200526

42026