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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33180882_33181077_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33180882 - 33181077

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTATCAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TTTTCCTGTATC

Flanking Amino Acid:

LKIRTSYQIYKECHQVLQMT

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

56.5

0.15

1.1

56.9

36.9

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

65.5

0.47

1.8

79.56

35.6

Associated Gene:

Gene:

TTC39B

Ensembl Gene ID:

ENSAPLG00000012421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012969

33158501 - 33200526

42026

ENSAPLT00000035501

33130273 - 33200526

70254

ENSAPLT00000032952

33125828 - 33200526

74699