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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33199323_33200429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33199323 - 33200429

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTATTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

AGTAACTTTATT

Flanking Amino Acid:

EKAVRYIETAKNNYKEYSME

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.2

35.1

Major BPS

75.1

0.62

65.6

Major PPT

85.8

0.81

0.9

80.8

36.6

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

49.7

0.06

1.9

69.14

41.5

Associated Gene:

Gene:

TTC39B

Ensembl Gene ID:

ENSAPLG00000012421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012969

33158501 - 33200526

42026

ENSAPLT00000035501

33130273 - 33200526

70254

ENSAPLT00000032952

33125828 - 33200526

74699