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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33269514_33279676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33269514 - 33279676

Intron Length:

10163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TCTTTTTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

79.5

0.66

81.2

28.2

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

66.4

0.38

1.4

67.62

40.4

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013363

33268989 - 33333396

64408

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408