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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33285526_33286013_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33285526 - 33286013

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTATGATGT

5'SS Class:

weak_major

3'SS Sequence:

TGTTGTGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TGTTTCACAATG

Flanking Amino Acid:

DQPQSFFPGPKHSPGQQCRN

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

60.6

38.9

Major BPS

68.5

0.46

75.3

29.8

Major PPT

79.1

0.65

72.2

42.7

Minor 5ss

47.6

-0.2

2.8

66.1

40.4

Minor BPS

49.6

-0.1

1.9

61.16

40.8

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408

ENSAPLT00000013363

33268989 - 33333396

64408