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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33288671_33291350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33288671 - 33291350

Intron Length:

2680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCAT

5'SS Class:

strong_major

3'SS Sequence:

ACTGCTTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCTTATACT

Flanking Amino Acid:

GLQHGRLTVRGGKGFMFTVS

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

80.3

34.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

69.4

0.44

64.5

40.9

Minor 5ss

35.2

-1.7

3.1

49.5

46.7

Minor BPS

64.5

0.54

87.77

37.8

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013363

33268989 - 33333396

64408

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408