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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33305088_33307797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33305088 - 33307797

Intron Length:

2710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TTAACTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TAACCTTTAACT

Flanking Amino Acid:

PVNDEKPVLSKKDDIEVNMG

Intron Amino Acid Position:

1280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

40.1

Major BPS

73.5

0.58

79.3

29.4

Major PPT

82.5

0.73

0.9

77.1

36.7

Minor 5ss

39.9

-1.1

3.1

51.2

39.7

Minor BPS

76.2

0.9

1.1

83.93

36.1

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408

ENSAPLT00000013363

33268989 - 33333396

64408