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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33307940_33309332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33307940 - 33309332

Intron Length:

1393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATCTATTTACTG

Flanking Amino Acid:

LPENGQLQLKVGKDWVTLQT

Intron Amino Acid Position:

1328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

82.7

30.4

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

87.2

0.84

0.6

31.1

Minor 5ss

40.2

-1.1

3.1

47.2

Minor BPS

48.2

-0.2

1.8

53.91

41.9

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408

ENSAPLT00000013363

33268989 - 33333396

64408