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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33317053_33319207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33317053 - 33319207

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCTAT

U12 Branch Point Sequence:

TTTGTTCTATGC

Flanking Amino Acid:

DPSGNSAVPQMLELQWSRIE

Intron Amino Acid Position:

1735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

56.1

0.15

1.5

58.5

47.9

Major PPT

75.7

0.58

0.8

68.2

32.1

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

42.5

-0.5

2.1

57.6

41.9

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013363

33268989 - 33333396

64408

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408