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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33322215_33323396_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33322215 - 33323396

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCTCT

5'SS Class:

weak_major

3'SS Sequence:

TTAATGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCATTTTTAATG

Flanking Amino Acid:

AVVKILDSEGGQCSSFHSSG

Intron Amino Acid Position:

1853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

39.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.6

0.62

73.8

41.3

Minor 5ss

59.3

0.31

2.3

74.9

41.1

Minor BPS

58.9

0.14

1.4

54.64

41.7

Associated Gene:

Gene:

FREM1

Ensembl Gene ID:

ENSAPLG00000012801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045918

33268989 - 33333396

64408

ENSAPLT00000041062

33268989 - 33333396

64408

ENSAPLT00000013363

33268989 - 33333396

64408