Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33392095_33392619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33392095 - 33392619

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CTGTCTTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CTTTCACTAATA

Flanking Amino Acid:

IEKMSNCCENVSRPRKPWQQ

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.8

38.2

Major BPS

0.75

78.6

Major PPT

0.63

0.8

73.5

31.5

Minor 5ss

37.3

-1.4

3.3

51.5

44.9

Minor BPS

57.4

0.23

73.29

38.6

Associated Gene:

Gene:

ZDHHC21

Ensembl Gene ID:

ENSAPLG00000013190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025636

33357821 - 33392793

34973

ENSAPLT00000013731

33353311 - 33392752

39442