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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33523833_33524254_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33523833 - 33524254

Intron Length:
422

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTACTTTTC

5'SS Class:
major

3'SS Sequence:
CTTCTCTTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCTCCAC

U12 Branch Point Sequence:
TTTCCCTCCACT

Flanking Amino Acid:
MDEFHPFIEAL

Intron Amino Acid Position:
2

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.1
68
38

Major BPS
47
-0.1
1.3
55.7
39.5

Major PPT
84.3
0.77
0.7
79.3
26.3

Minor 5ss
43.9
-0.7
3
58.5
41.3

Minor BPS
62.7
0.48
2
86.08
39.7

Associated Gene:

Gene:
NFIB

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33523830 - 33699769
175940