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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_33850248_33852191_F

Intron Information:

Intron Rank:

143076

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33850248 - 33852191

Intron Length:

1944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTTATT

5'SS Class:

major

3'SS Sequence:

TGGTAATTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTCTGGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.2

75.8

39.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

51.5

0.03

1.2

49.6

47.2

Minor 5ss

36.7

-1.5

51.9

44.6

Minor BPS

47.3

-0.1

2.5

76.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046516

33850073 - 33854212

4140