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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34004141_34012671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34004141 - 34012671

Intron Length:

8531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTGGCTCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TAGCACATAATG

Flanking Amino Acid:

QTSVQQLRDQNGSPANVLEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

65.8

0.35

59.5

41.7

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

47.1

-0.3

1.8

52.42

41.8

Associated Gene:

Gene:

MPDZ

Ensembl Gene ID:

ENSAPLG00000013686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045139

34003288 - 34097571

94284

ENSAPLT00000044805

34003347 - 34097571

94225

ENSAPLT00000038640

34003347 - 34097588

94242

ENSAPLT00000029758

34003288 - 34097571

94284