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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34015937_34018151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34015937 - 34018151

Intron Length:

2215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTATTCCTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCACAT

Flanking Amino Acid:

ASTVSAHSNPVHWQHVETIE

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

83.5

29.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.5

0.35

1.7

77.9

36.3

Minor 5ss

34.3

-1.8

2.8

43.1

43.9

Minor BPS

44.7

-0.3

2.2

72.23

43.8

Associated Gene:

Gene:

MPDZ

Ensembl Gene ID:

ENSAPLG00000013686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029758

34003288 - 34097571

94284

ENSAPLT00000044805

34003347 - 34097571

94225

ENSAPLT00000022916

34003347 - 34097571

94225

ENSAPLT00000038640

34003347 - 34097588

94242

ENSAPLT00000020647

34003288 - 34097571

94284

ENSAPLT00000035705

34003288 - 34097571

94284

ENSAPLT00000014337

34003347 - 34097571

94225

ENSAPLT00000034187

34003288 - 34097571

94284

ENSAPLT00000045139

34003288 - 34097571

94284