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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34028038_34029719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34028038 - 34029719

Intron Length:

1682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CTCAATCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GTCTAATAAACT

Flanking Amino Acid:

RIHVGDQIIVVDGTNLQGFT

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

31.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

0.52

0.9

65.6

35.6

Minor 5ss

37.6

-1.4

2.8

48.3

41.8

Minor BPS

48.6

-0

2.1

70.99

45.3

Associated Gene:

Gene:

MPDZ

Ensembl Gene ID:

ENSAPLG00000013686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020647

34003288 - 34097571

94284

ENSAPLT00000035705

34003288 - 34097571

94284

ENSAPLT00000014337

34003347 - 34097571

94225

ENSAPLT00000034187

34003288 - 34097571

94284

ENSAPLT00000045139

34003288 - 34097571

94284

ENSAPLT00000029758

34003288 - 34097571

94284

ENSAPLT00000044805

34003347 - 34097571

94225

ENSAPLT00000022916

34003347 - 34097571

94225

ENSAPLT00000038640

34003347 - 34097588

94242