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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34032960_34036780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34032960 - 34036780

Intron Length:

3821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TAATCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

RIMGSDYEIVVAVVSKFSES

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.6

0.51

0.9

70.1

40.8

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

MPDZ

Ensembl Gene ID:

ENSAPLG00000013686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020647

34003288 - 34097571

94284

ENSAPLT00000035705

34003288 - 34097571

94284

ENSAPLT00000014337

34003347 - 34097571

94225

ENSAPLT00000034187

34003288 - 34097571

94284

ENSAPLT00000045139

34003288 - 34097571

94284

ENSAPLT00000029758

34003288 - 34097571

94284

ENSAPLT00000044805

34003347 - 34097571

94225

ENSAPLT00000022916

34003347 - 34097571

94225

ENSAPLT00000038640

34003347 - 34097588

94242