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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34069534_34076839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34069534 - 34076839

Intron Length:

7306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTATTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTC

Flanking Amino Acid:

MVQSIISRPRAFSQSDSEPE

Intron Amino Acid Position:

1250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

38.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.8

0.71

0.8

76.8

31.7

Minor 5ss

42.5

-0.8

2.9

49.4

46.6

Minor BPS

72.6

0.69

1.5

81.59

Associated Gene:

Gene:

MPDZ

Ensembl Gene ID:

ENSAPLG00000013686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020647

34003288 - 34097571

94284

ENSAPLT00000038640

34003347 - 34097588

94242

ENSAPLT00000014337

34003347 - 34097571

94225

ENSAPLT00000035705

34003288 - 34097571

94284

ENSAPLT00000034187

34003288 - 34097571

94284

ENSAPLT00000045139

34003288 - 34097571

94284

ENSAPLT00000029758

34003288 - 34097571

94284

ENSAPLT00000044805

34003347 - 34097571

94225