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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34079968_34080233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34079968 - 34080233

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GAATCTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TATGCTGTAACT

Flanking Amino Acid:

APSKVKIIFIRNKDAVNQMA

Intron Amino Acid Position:

1400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

67.3

0.39

63.6

42.2

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

59.2

0.37

2.1

80.6

41.6

Associated Gene:

Gene:

MPDZ

Ensembl Gene ID:

ENSAPLG00000013686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022916

34003347 - 34097571

94225

ENSAPLT00000038640

34003347 - 34097588

94242

ENSAPLT00000020647

34003288 - 34097571

94284

ENSAPLT00000035705

34003288 - 34097571

94284

ENSAPLT00000014337

34003347 - 34097571

94225

ENSAPLT00000034187

34003288 - 34097571

94284

ENSAPLT00000045139

34003288 - 34097571

94284

ENSAPLT00000029758

34003288 - 34097571

94284

ENSAPLT00000044805

34003347 - 34097571

94225