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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34187871_34209750_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34187871 - 34209750

Intron Length:
21880

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTGGG

5'SS Class:
major

3'SS Sequence:
TTTTGCCTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ATCTTTTTAATT

Flanking Amino Acid:
GATSRMYKQKVNLRATDVKL

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1.3
67.1
44.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.4
0.64
0.8
73.2
31.8

Minor 5ss
27.5
-2.6
2.9
32.4
42.2

Minor BPS
73.5
0.82
1.1
81.14
35.2

Associated Gene:

Gene:
LURAP1L

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34187496 - 34210599
23104