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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34366629_34367552_F

Intron Information:

Intron Rank:
129477
Intron Class:
major
Intron Phase:
Intron Coordinates:
34366629 - 34367552
Intron Length:
924

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAGGTGTA
5'SS Class:
major
3'SS Sequence:
CCCTTTCTTTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATCTAAA
U12 Branch Point Sequence:
TTATACCTACAT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.9
0.66
1.1
72.4
39.5
Major BPS
76.5
0.66
0.8
75.9
24.9
Major PPT
85.7
0.8
0.7
83.6
24.7
Minor 5ss
34.4
-1.8
3.5
39.8
46.2
Minor BPS
46.9
-0.1
2.2
72.35
43.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000019649
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035352
34350100 - 34367678
17579