Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34719573_34727358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34719573 - 34727358

Intron Length:

7786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTTGTTTTTAAG

Flanking Amino Acid:

LWQLLCADKEFVWSLW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

64.8

35.2

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

78.3

0.64

82.6

32.9

Minor 5ss

29.5

-2.3

3.2

35.2

41.4

Minor BPS

45.4

-0.5

1.9

51.03

43.7

Associated Gene:

Gene:

CNTLN

Ensembl Gene ID:

ENSAPLG00000007696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025583

34719421 - 34772042

52622