Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_34777989_34778890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34777989 - 34778890

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCCAGCCTC

5'SS Class:

major

3'SS Sequence:

TATAGCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTGGTTAATA

Flanking Amino Acid:

TAETTSYQKVCSAHSCVVKC

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.4

67.4

40.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

68.2

0.41

63.8

42.3

Minor 5ss

-2.3

4.1

47.4

41.4

Minor BPS

58.3

0.26

2.4

78.78

38.5

Associated Gene:

Gene:

CNTLN

Ensembl Gene ID:

ENSAPLG00000007696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025069

34725273 - 34778976

53704