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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35399419_35410616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35399419 - 35410616

Intron Length:

11198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCACAA

U12 Branch Point Sequence:

ACTCACTGACCT

Flanking Amino Acid:

NIRYRTCSNVDCPPEAGDFR

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

59.7

0.24

29.8

Major PPT

88.1

0.86

0.6

24.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

47.2

-0.1

1.9

66.01

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025609

35090704 - 35504470

413767

ENSAPLT00000020470

35364713 - 35504470

139758

ENSAPLT00000006867

35175210 - 35504470

329261

ENSAPLT00000048526

35090704 - 35504470

413767