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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35439650_35446787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35439650 - 35446787

Intron Length:

7138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

ACATCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTGTTGTTACAT

Flanking Amino Acid:

GPLTADFTVKIRYAGAADSS

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

80.1

0.68

0.9

77.1

36.2

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

47.5

-0.1

2.3

72.17

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025609

35090704 - 35504470

413767

ENSAPLT00000020470

35364713 - 35504470

139758

ENSAPLT00000006867

35175210 - 35504470

329261

ENSAPLT00000048526

35090704 - 35504470

413767