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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35469951_35479596_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35469951 - 35479596

Intron Length:

9646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTCTCTCTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTCTCTCTATCA

Flanking Amino Acid:

EEGAVVSEEPSLLIGFSRFI

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

74.5

41.9

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

81.9

0.72

0.8

81.9

28.5

Minor 5ss

41.7

-0.9

3.1

38.8

Minor BPS

55.2

0.16

1.9

71.61

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025609

35090704 - 35504470

413767

ENSAPLT00000020470

35364713 - 35504470

139758

ENSAPLT00000006867

35175210 - 35504470

329261

ENSAPLT00000048526

35090704 - 35504470

413767