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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35538359_35538814_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35538359 - 35538814

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATACCAC

5'SS Class:

weak_major

3'SS Sequence:

AATCTGTTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTTTCCCAATCT

Flanking Amino Acid:

TESSQLFLCLKPPRPLPQLE

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.1

39.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

63.6

0.31

43.7

Minor 5ss

45.3

-0.5

2.9

58.6

40.7

Minor BPS

49.5

0.04

2.2

77.58

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024406

35536778 - 35562360

25583

ENSAPLT00000006729

35515617 - 35563575

47959