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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35551120_35553183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35551120 - 35553183

Intron Length:

2064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCCCTCCCATTT

Flanking Amino Acid:

LIQNTSLTIQEYQWSVDKLM

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.7

44.5

Major BPS

84.4

0.85

34.5

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

43.4

-0.7

2.9

58.6

45.9

Minor BPS

40.1

-0.6

1.9

53.49

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006729

35515617 - 35563575

47959