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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35576728_35581149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35576728 - 35581149

Intron Length:

4422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTACATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TTCCTCTTACAT

Flanking Amino Acid:

AKMDTKSTYEDDYVLWNEPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

81.5

0.71

0.8

78.2

34.6

Minor 5ss

-1.1

53.2

44.1

Minor BPS

55.6

0.26

1.7

74.05

42.7

Associated Gene:

Gene:

SAXO1

Ensembl Gene ID:

ENSAPLG00000006403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006636

35575781 - 35582385

6605