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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35584402_35617202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35584402 - 35617202

Intron Length:

32801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

AGGCACTAAATC

Flanking Amino Acid:

ISSNLVRKLKDATIVHICPP

Intron Amino Acid Position:

945

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

46.2

-0.3

1.8

52.05

Associated Gene:

Gene:

HAUS6

Ensembl Gene ID:

ENSAPLG00000006057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042971

35581150 - 35630244

49095

ENSAPLT00000021136

35583067 - 35630244

47178