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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35627389_35627967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35627389 - 35627967

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

AACTTTCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TATACCTCAATT

Flanking Amino Acid:

MIKNLKKNSVGSDTSSTEAV

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

76.8

0.67

0.9

75.9

Major PPT

0.34

0.9

63.3

37.6

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

68.7

0.66

1.5

82.75

38.1

Associated Gene:

Gene:

HAUS6

Ensembl Gene ID:

ENSAPLG00000006057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042971

35581150 - 35630244

49095

ENSAPLT00000021136

35583067 - 35630244

47178

ENSAPLT00000006293

35615641 - 35630244

14604