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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35628101_35629089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35628101 - 35629089

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCACTTGTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTGTGTTTAAAT

Flanking Amino Acid:

QCCSWLKDIANESKNYLPPI

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

65.6

0.35

1.1

63.3

41.9

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

62.7

0.48

1.9

80.75

41.3

Associated Gene:

Gene:

HAUS6

Ensembl Gene ID:

ENSAPLG00000006057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042971

35581150 - 35630244

49095

ENSAPLT00000021136

35583067 - 35630244

47178

ENSAPLT00000006293

35615641 - 35630244

14604