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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35638786_35639512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35638786 - 35639512

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAC

U12 Branch Point Sequence:

TCTTACTTTACT

Flanking Amino Acid:

ISQLHHTVNLIEYARKNMNS

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

65.2

0.38

57.3

39.1

Major PPT

70.8

0.47

44.2

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

67.6

0.64

1.8

85.35

40.8

Associated Gene:

Gene:

PLIN2

Ensembl Gene ID:

ENSAPLG00000005745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005975

35637565 - 35641817

4253