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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35685816_35764679_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35685816 - 35764679

Intron Length:

78864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

AAAAAAAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AAAAAAAAAAAA

Flanking Amino Acid:

SVLNLVIVKKGEKGGREVPA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

41.8

-0.4

1.1

33.2

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

32.9

-1.3

1.9

38.05

31.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046611

35684734 - 35842835

158102

ENSAPLT00000039013

35684734 - 35765584

80851