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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35835_37342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35835 - 37342

Intron Length:

1508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTGGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TGGGGCTGACCC

Flanking Amino Acid:

LSSMGMRPLNGQSMRQLQLT

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

0.54

0.9

66.1

35.8

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

42.2

-0.6

2.1

51.46

45.5

Associated Gene:

Gene:

RUSC2

Ensembl Gene ID:

ENSAPLG00000023823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001571

26121 - 58339

32219