Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35845556_35851653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35845556 - 35851653

Intron Length:

6098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TGCATTTGAATA

Flanking Amino Acid:

LKYYDTMTEEGKFKERASIL

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

76.8

0.67

40.9

Major PPT

82.5

0.73

0.7

24.2

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

49.6

-0

1.4

56.88

36.7

Associated Gene:

Gene:

SLC24A2

Ensembl Gene ID:

ENSAPLG00000020062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047599

35815981 - 35929783

113803

ENSAPLT00000017817

35819024 - 35929783

110760