Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_35845556_35872283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35845556 - 35872283

Intron Length:

26728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCCTA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TGCATTTGAATA

Flanking Amino Acid:

MIHTLDPLAEGKFKERASIL

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

70.6

41.3

Major BPS

76.8

0.67

40.9

Major PPT

82.5

0.73

0.7

24.2

Minor 5ss

47.5

-0.2

2.8

64.7

46.6

Minor BPS

49.6

-0

1.4

56.88

36.7

Associated Gene:

Gene:

SLC24A2

Ensembl Gene ID:

ENSAPLG00000020062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036873

35819024 - 35929783

110760

ENSAPLT00000004834

35819432 - 35929783

110352