About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36085308_36086943_R

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
36085308 - 36086943
Intron Length:
1636

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAATGGC
5'SS Class:
strong_major
3'SS Sequence:
AATTTGTTTCTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGTTTAT
U12 Branch Point Sequence:
AGTTGTTTATGG
Flanking Amino Acid:
KQIKNGDCDKAYLDELVELH
Intron Amino Acid Position:
457

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.8
0.82
0.9
73
36.9
Major BPS
81.3
0.78
1.1
71.7
44.6
Major PPT
75.3
0.57
0.9
66.6
44.2
Minor 5ss
32.4
-2
3.3
43.9
43.9
Minor BPS
43.3
-0.6
2.2
49.8
44.5

Associated Gene:

Gene:
MLLT3
Ensembl Gene ID:
ENSAPLG00000004429
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000019493
36075671 - 36215515
139845
ENSAPLT00000004552
36075671 - 36153884
78214
ENSAPLT00000043492
36075671 - 36161584
85914
ENSAPLT00000022051
36075671 - 36171359
95689