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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36238337_36238774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

36238337 - 36238774

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

83.9

30.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.9

0.65

0.9

72.9

36.7

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625