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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36238864_36242036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36238864 - 36242036

Intron Length:

3173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTACCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTTACTTACCT

Flanking Amino Acid:

EFPNTVIQSQAVGHLIAAVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

75.4

0.57

0.9

73.5

36.8

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

73.3

0.81

1.8

93.1

35.2

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625