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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36244497_36249579_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36244497 - 36249579

Intron Length:

5083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGTTG

5'SS Class:

major

3'SS Sequence:

TTTTTGTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTTGTCAACA

Flanking Amino Acid:

HGALNLIPSARNVHGLVKTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.2

43.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

81.4

0.71

0.9

77.7

35.5

Minor 5ss

-1.2

3.6

55.1

49.2

Minor BPS

0.28

2.2

79.1

37.4

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003744

36238236 - 36350860

112625

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117