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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36258046_36260142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36258046 - 36260142

Intron Length:

2097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTTTTGAACT

Flanking Amino Acid:

ITVFFQQCPERAQSSCVGIM

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.3

0.64

0.9

71.6

38.3

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

72.7

0.79

1.3

86.81

32.2

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625