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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_36260348_36262847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36260348 - 36262847

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTTG

5'SS Class:

major

3'SS Sequence:

TACCTGTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATT

Flanking Amino Acid:

LLYDLIPHLQLKDLPQVTEA

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.7

43.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.6

0.64

0.9

72.4

37.3

Minor 5ss

38.3

-1.3

3.7

54.5

49.7

Minor BPS

0.99

87.87

31.1

Associated Gene:

Gene:

FOCAD

Ensembl Gene ID:

ENSAPLG00000003581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038083

36238775 - 36350860

112086

ENSAPLT00000034849

36238236 - 36349352

111117

ENSAPLT00000003744

36238236 - 36350860

112625